KCNJ2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KCNJ2 mutation is significantly associated with the RNA expression of many other genes, with 2,276 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KCNJ2-associated genes across cancer lineages are DYNLT3P2, HSPE1P14, and TPI1. Each is linked with KCNJ2 in more than 3 cancer types. Because this analysis shows association rather than direction, both KCNJ2-to-partner and partner-to-KCNJ2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DYNLT3P2 grouped by KCNJ2-low versus KCNJ2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNJ2→partner) and Y-score (partner→KCNJ2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECDYNLT3P2 →+0.272+1.643<.001.00134
LIHCHSPE1P14 →+0.081+3.268<.001.00733
SKCMTPI1 →+0.552+3.623<.001.00133
SKCMGOT1 →+0.553+2.254<.001.00633
SKCMMED9 →+0.466+2.228<.001.00633
SKCMANKRD9 →+1.029+3.372<.001.00433
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,276 associations by consensus.

DYNLT3P2 by KCNJ2 expression — UCEC

Box plot of DYNLT3P2 in KCNJ2-low vs KCNJ2-high samples in UCEC.

Explore this box plot interactively →

Exploration