KCNIP4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KCNIP4 mutation is significantly associated with the RNA expression of many other genes, with 1,407 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible KCNIP4-associated genes across cancer lineages are RDH11, ZNF616, and C14orf119. Each is linked with KCNIP4 in more than 2 cancer types. Because this analysis shows association rather than direction, both KCNIP4-to-partner and partner-to-KCNIP4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNIP4→partner) and Y-score (partner→KCNIP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMRDH11 →+0.484+2.616.005<.00133
UCECZNF616 →+0.535+3.483<.001.00233
UCECC14orf119 →+0.320+3.021.005<.00132
UCECLRRC57 →+0.392+2.321.008.00632
UCECLINC00471 →+0.438+3.053.002<.00132
UCECNGRN →+0.610+2.332.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,407 associations by consensus.

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