KCNH4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, KCNH4 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,924 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible KCNH4-associated proteins across cancer lineages are RCSD1, ARHGAP4, and STK10. Each is linked with KCNH4 in more than 4 cancer types. Because this analysis shows association rather than direction, both KCNH4-to-partner and partner-to-KCNH4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, KCNH4 versus RCSD1 in UCEC, with a Pearson correlation of 0.28.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (KCNH4→partner) and Y-score (partner→KCNH4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRCSD1 →+0.450+0.631.001.00635
LSCCARHGAP4 →+0.430+0.316<.001<.00134
LSCCSTK10 →+0.536+0.433<.001<.00134
OVMYO1F →+0.405+0.180.005.00634
UCECNADK →+0.372+0.386<.001.00234
PDACPRAM1_S204 →+0.853+0.282<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,924 associations by consensus.

KCNH4 vs RCSD1 — UCEC

Per-sample scatter of KCNH4 vs RCSD1 in UCEC (Pearson r = 0.28).

Explore this scatter interactively →

Exploration