JOSD2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, JOSD2 protein abundance is significantly associated with the RNA expression of many other genes, with 4,219 significant associations in total. GBM shows the largest number of these associations.

The most reproducible JOSD2-associated genes across cancer lineages are POM121L9P, PPP4R3A, and IDS. Each is linked with JOSD2 in more than 3 cancer types. Because this analysis shows association rather than direction, both JOSD2-to-partner and partner-to-JOSD2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, JOSD2 versus POM121L9P in GBM, with a Pearson correlation of 0.29.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (JOSD2→partner) and Y-score (partner→JOSD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPOM121L9P →+0.791+0.440.003.00134
LSCCPPP4R3A →-0.461-0.286<.001.00733
LUADIDS →+0.531+0.262.003.00133
LSCCPARP2 →-0.550-0.313<.001.00333
GBMCTSB →+0.784+0.364<.001.00133
GBMSLC37A2 →+0.903+0.563.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,219 associations by consensus.

JOSD2 vs POM121L9P — GBM

Per-sample scatter of JOSD2 vs POM121L9P in GBM (Pearson r = 0.29).

Explore this scatter interactively →

Exploration