JMJD1C

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, JMJD1C protein abundance is significantly associated with the RNA expression of many other genes, with 4,983 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible JMJD1C-associated genes across cancer lineages are JMJD1C-AS1, DDX50, and DDX21. Each is linked with JMJD1C in more than 4 cancer types. Because this analysis shows association rather than direction, both JMJD1C-to-partner and partner-to-JMJD1C results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, JMJD1C versus JMJD1C-AS1 in LUAD, with a Pearson correlation of 0.32.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (JMJD1C→partner) and Y-score (partner→JMJD1C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADJMJD1C-AS1 →+0.467+0.158.002.00135
UCECDDX50 →+0.536+0.186<.001<.00125
LUADDDX21 →+0.597+0.219<.001<.00134
GBMMAPK8 →+0.388+0.189<.001.00133
BRCAKIF20B →+0.648+0.179<.001<.00133
BRCAPPP1R18 →+0.621+0.182.002.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,983 associations by consensus.

JMJD1C vs JMJD1C-AS1 — LUAD

Per-sample scatter of JMJD1C vs JMJD1C-AS1 in LUAD (Pearson r = 0.32).

Explore this scatter interactively →

Exploration