ITGB6

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ITGB6 mutation is significantly associated with the RNA expression of many other genes, with 23 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ITGB6-associated genes across cancer lineages are DRD1, KRTAP3-2, and FKBP6. Each is linked with ITGB6 in more than 1 cancer types. Because this analysis shows association rather than direction, both ITGB6-to-partner and partner-to-ITGB6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DRD1 grouped by ITGB6-low versus ITGB6-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ITGB6→partner) and Y-score (partner→ITGB6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaDRD1 →+0.141+4.192<.001.00331
BLOOD_LymphomaKRTAP3-2 →+0.050+4.662<.001.00331
BLOOD_LymphomaFKBP6 →+0.055+4.321<.001.00231
SKINSSTR4 →+0.035+4.347.003.00131
SKINGC →+0.077+4.054<.001.00431
BLOOD_LeukemiaPHOX2B →+0.019+4.365<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 23 associations by consensus.

DRD1 by ITGB6 expression — BLOOD_Lymphoma

Box plot of DRD1 in ITGB6-low vs ITGB6-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration