ITGB3

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ITGB3 mutation is significantly associated with the RNA expression of many other genes, with 4,798 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ITGB3-associated genes across cancer lineages are AUNIP, LINC02420, and RCC1. Each is linked with ITGB3 in more than 3 cancer types. Because this analysis shows association rather than direction, both ITGB3-to-partner and partner-to-ITGB3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, AUNIP grouped by ITGB3-low versus ITGB3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ITGB3→partner) and Y-score (partner→ITGB3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECAUNIP →+0.490+1.785.001.00134
LIHCLINC02420 →+0.050+4.544.001.00933
UCECRCC1 →+0.384+1.986<.001<.00133
UCECZFP3 →-0.632-2.078<.001<.00133
SKCMRPL23AP82 →+0.578+2.198<.001.00133
UCECJPT1 →+0.335+2.180.003.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,798 associations by consensus.

AUNIP by ITGB3 expression — UCEC

Box plot of AUNIP in ITGB3-low vs ITGB3-high samples in UCEC.

Explore this box plot interactively →

Exploration