ITCH

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ITCH RNA expression is significantly associated with the go_rna of many other GO terms, with 4,648 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible ITCH-associated GO terms across cancer lineages are Protein K29-linked ubiquitination, Mitotic centrosome separation, and Endosomal transport. Each is linked with ITCH in more than 16 cancer types. Because this analysis shows association rather than direction, both ITCH-to-partner and partner-to-ITCH results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein K29-linked ubiquitination grouped by ITCH-low versus ITCH-high in OESOPHAGUS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ITCH→partner) and Y-score (partner→ITCH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSProtein K29-linked ubiquitination →+0.163+0.953.006.009317
BREASTMitotic centrosome separation →+0.168+0.989<.001<.001315
STOMACHEndosomal transport →+0.053+0.762<.001.002314
OVARYGolgi vesicle transport →+0.063+0.837<.001<.001313
STOMACHRegulation of protein deubiquitination →+0.197+1.415<.001<.001313
BREASTRegulation of hematopoietic stem cell differentiation →+0.127+0.999<.001<.001313
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,648 associations by consensus.

Protein K29-linked ubiquitination by ITCH expression — OESOPHAGUS

Box plot of Protein K29-linked ubiquitination in ITCH-low vs ITCH-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration