ISY1-RAB43

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, ISY1-RAB43 RNA differs between tumor and matched normal tissue in 9 of 18 cancer types tested, making tumor–normal expression one of ISY1-RAB43’s most consistent transcriptional readouts.

The strongest signal is observed in lung adenocarcinoma (LUAD), where ISY1-RAB43 RNA is repressed in tumor relative to normal tissue. In most cancer types ISY1-RAB43 is over-expressed in tumor, although a few such as LUAD and KICH show the opposite, repressed pattern.

LUAD, KIRC, and KICH are the cancer types where ISY1-RAB43 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in ISY1-RAB43 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUADMaleII,III,IV−0.023<.0018view →
KIRCAllAll+0.017<.0018view →
KICHAllII,III,IV−0.027<.0017view →
KIRPFemaleAll+0.034.0015view →
HNSCAllAll+0.022.0065view →
BRCAAllII,III,IV−0.012.0054view →
PAADMaleAll+0.025.0372view →
CHOLAllAll+0.025.0062view →
THCAAllII,III,IV−0.013.0401view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 9 strongest of 9 lineages.

ISY1-RAB43–LUAD

Tumor-vs-normal expression box plot for ISY1-RAB43 RNA in LUAD.

Open the LUAD breakdown →

Exploration