INVS

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, INVS RNA expression is significantly associated with the go_rna of many other GO terms, with 4,554 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible INVS-associated GO terms across cancer lineages are mRNA export from nucleus, Nucleic acid transport, and RNA transport. Each is linked with INVS in more than 17 cancer types. Because this analysis shows association rather than direction, both INVS-to-partner and partner-to-INVS results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, mRNA export from nucleus grouped by INVS-low versus INVS-high in OESOPHAGUS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (INVS→partner) and Y-score (partner→INVS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSmRNA export from nucleus →+0.122+0.999.001.001318
OESOPHAGUSNucleic acid transport →+0.110+0.922.001.002317
OESOPHAGUSRNA transport →+0.110+0.922.001.002317
OESOPHAGUSEstablishment of RNA localization →+0.106+0.893.001.003317
OESOPHAGUSRNA localization →+0.100+0.877.001.003317
UPPER_AERODIGESTIVE_TRACTRNA export from nucleus →+0.123+1.104<.001<.001317
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,554 associations by consensus.

mRNA export from nucleus by INVS expression — OESOPHAGUS

Box plot of mRNA export from nucleus in INVS-low vs INVS-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration