INTS6

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, INTS6 mutation is significantly associated with the RNA expression of many other genes, with 40 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible INTS6-associated genes across cancer lineages are RSPH6A, IAPP, and KLHDC7B. Each is linked with INTS6 in more than 1 cancer types. Because this analysis shows association rather than direction, both INTS6-to-partner and partner-to-INTS6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RSPH6A grouped by INTS6-low versus INTS6-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (INTS6→partner) and Y-score (partner→INTS6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINERSPH6A →+0.124+3.688<.001.00131
LARGE_INTESTINEIAPP →+0.412+3.228<.001.00331
LARGE_INTESTINEKLHDC7B →+0.682+3.485<.001.00431
LARGE_INTESTINEOR2C1 →+0.125+4.047<.001.00131
LARGE_INTESTINELONRF2 →+0.505+3.392<.001.00631
LARGE_INTESTINENUPR2 →+0.205+2.688.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 40 associations by consensus.

RSPH6A by INTS6 expression — LARGE_INTESTINE

Box plot of RSPH6A in INTS6-low vs INTS6-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration