IMPACT

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IMPACT mutation is significantly associated with the RNA expression of many other genes, with 867 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible IMPACT-associated genes across cancer lineages are MIR6803, RN7SKP214, and LINC01029. Each is linked with IMPACT in more than 1 cancer types. Because this analysis shows association rather than direction, both IMPACT-to-partner and partner-to-IMPACT results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR6803 grouped by IMPACT-low versus IMPACT-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IMPACT→partner) and Y-score (partner→IMPACT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR6803 →+0.197+4.893<.001.00132
UCECRN7SKP214 →+0.313+2.749<.001<.00132
COADLINC01029 →+0.276+4.543<.001.00532
COADMIR3135A →+0.882+4.602<.001.00832
UCECRPL36P19 →+0.116+2.811<.001.00432
SKCMRNU5A-4P →+0.372+3.669<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 867 associations by consensus.

MIR6803 by IMPACT expression — UCEC

Box plot of MIR6803 in IMPACT-low vs IMPACT-high samples in UCEC.

Explore this box plot interactively →

Exploration