IGLV3-9

associated omics data
immunoglobulin lambda variable 3-9Genealiases: IGLV39 · V2-6

Q-omics provides the consensus-scored IGLV3-9 profile across patient tissues and cancer cell-line models. IGLV3-9 expression is associated with patient survival in 22 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGLV3-9 is differentially expressed in 8, with the highest sampling consensus in COAD. Additionally, IGLV3-9 protein abundance shows 14,224 significant protein co-abundance associations, with the highest sampling consensus in GBM. Together, these results highlight HNSC, COAD, and GBM as cancer lineages where IGLV3-9 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGLV3-9 survival associations across molecular data types. IGLV3-9 RNA expression shows survival associations in the most cancer types (22), followed by mutation status (4) and mass-spec protein abundance (4). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGLV3-9 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier22HNSC (144)view →
MutationKaplan–Meier4SKCM (15)view →
Protein (mass-spec)Kaplan–Meier4UCEC (48)view →
This table ranks reproducible IGLV3-9 RNA expression–survival associations across cancer types. High IGLV3-9 expression shows unfavorable associations in UVM, but favorable associations in HNSC, SKCM, BRCA, UCS and CESC. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGLV3-9 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.6760.530<.001144view →
SKCMOSMedianAll0.8360.724<.00194view →
BRCADFSMedianAll0.9680.929.00166view →
UCSOSTertileII,III,IV0.6090.194.00660view →
UVMDFSTertileII,III,IV0.4830.830.00152view →
CESCDFSQuartileAll0.8450.666.00638view →
Pink = unfavorable, green = favorable. all 22 lineages →

IGLV3-9-HNSC (DFS)

Kaplan–Meier survival curve for IGLV3-9 RNA expression in HNSC: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes IGLV3-9 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 8, while mass-spec protein shows differences in 5. The strongest signals are observed in COAD for RNA and HNSC for protein.
IGLV3-9 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot8COAD (10)view →
Protein (mass-spec)Box plot5HNSC (8)view →
This table ranks reproducible tumor–normal expression differences for IGLV3-9. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGLV3-9 shows lower tumor expression in COAD, LIHC and BRCA and higher tumor expression in LUAD, KIRC and ESCA. The COAD box plot shows higher IGLV3-9 RNA expression in normal versus tumor tissue (log2 FC = −3.519, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleIII,IV−3.519<.00110view →
LUADMaleAll+2.376<.0017view →
KIRCMaleAll+1.338<.0016view →
LIHCMaleAll−1.493<.0015view →
BRCAFemaleII,III,IV−0.807.0054view →
ESCAAllII,III,IV+4.450.0042view →
Green = repressed in tumor. all 8 lineages →

IGLV3-9-COAD

Tumor-vs-normal expression box plot for IGLV3-9 in COAD.

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Cross-omics associations

This table shows molecular features associated with IGLV3-9 in patient tissues and cancer cell lines. In patient samples, IGLV3-9 shows the broadest associations at the RNA and protein expression levels, with GBM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)14,224GBM (4286)view →
RNA8,359GBM (4525)view →
RNA
Protein (mass-spec)11,530LSCC (3692)view →
RNA8,847TGCT (2524)view →
Mutation
RNA40UCEC (17)view →
Infiltrating cells1LIHC (1)view →