IGLV3-2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGLV3-2 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,644 significant associations in total. STAD shows the largest number of these associations.

The most reproducible IGLV3-2-associated GO terms across cancer lineages are Immunoglobulin production, B cell mediated immunity, and Lymphocyte costimulation. Each is linked with IGLV3-2 in more than 14 cancer types. Because this analysis shows association rather than direction, both IGLV3-2-to-partner and partner-to-IGLV3-2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Immunoglobulin production grouped by IGLV3-2-low versus IGLV3-2-high in THCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (IGLV3-2→partner) and Y-score (partner→IGLV3-2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
THCAImmunoglobulin production →+0.087+0.069<.001<.001315
THCAB cell mediated immunity →+0.120+0.070<.001<.001314
SKCMLymphocyte costimulation →+0.074+0.112<.001.002314
SKCMPositive regulation of T cell proliferation →+0.077+0.065<.001<.001314
STADT cell activation involved in immune response →+0.058+0.074<.001<.001313
THCARegulation of antigen processing and presentation →+0.096+0.068<.001<.001313
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,644 associations by consensus.

Immunoglobulin production by IGLV3-2 expression — THCA

Box plot of Immunoglobulin production in IGLV3-2-low vs IGLV3-2-high samples in THCA.

Explore this box plot interactively →

Exploration