IGKV2OR2-2

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, IGKV2OR2-2 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of IGKV2OR2-2’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where IGKV2OR2-2 RNA is repressed in tumor relative to normal tissue. In most cancer types IGKV2OR2-2 is over-expressed in tumor, although a few such as COAD and READ show the opposite, repressed pattern.

COAD, READ, and STAD are the cancer types where IGKV2OR2-2 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in IGKV2OR2-2 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADMaleAll−0.544<.00110view →
READAllAll−0.373.0023view →
STADMaleAll−0.263.0043view →
CHOLAllII,III,IV−0.295.0072view →
LUADAllAll+0.142.0052view →
BRCAAllIII,IV−0.121.0172view →
LIHCAllAll−0.022.0272view →
HNSCAllIV−0.100.0411view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

IGKV2OR2-2–COAD

Tumor-vs-normal expression box plot for IGKV2OR2-2 RNA in COAD.

Open the COAD breakdown →

Exploration