IGKV2D-18

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, IGKV2D-18 RNA differs between tumor and matched normal tissue in 7 of 18 cancer types tested, making tumor–normal expression one of IGKV2D-18’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where IGKV2D-18 RNA is repressed in tumor relative to normal tissue. In most cancer types IGKV2D-18 is over-expressed in tumor, although a few such as COAD and READ show the opposite, repressed pattern.

COAD, READ, and LUAD are the cancer types where IGKV2D-18 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in IGKV2D-18 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADAllAll−0.697<.00111view →
READAllAll−0.621<.0017view →
LUADAllAll+0.397<.0017view →
BRCAFemaleAll−0.184.0204view →
STADMaleAll−0.594.0213view →
THCAMaleIII,IV+0.155.0402view →
KIRCMaleAll+0.088.0252view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 7 strongest of 7 lineages.

IGKV2D-18–COAD

Tumor-vs-normal expression box plot for IGKV2D-18 RNA in COAD.

Open the COAD breakdown →

Exploration