IGKV1OR-3

associated omics data
immunoglobulin kappa variable 1/OR-3 (pseudogene)Genealiases: IGKV1/OR-3 · IGKV1OR3 · IGKVPZ3

Q-omics provides the consensus-scored IGKV1OR-3 profile across patient tissues and cancer cell-line models. IGKV1OR-3 expression is associated with patient survival in 16 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, IGKV1OR-3 is differentially expressed in 8, with the highest sampling consensus in COAD. Additionally, IGKV1OR-3 RNA expression shows 6,508 significant pathway-activity associations, with the highest sampling consensus in BRCA. Together, these results highlight HNSC, COAD, and BRCA as cancer lineages where IGKV1OR-3 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes IGKV1OR-3 survival associations across molecular data types. IGKV1OR-3 RNA expression shows survival associations in the most cancer types (16). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
IGKV1OR-3 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier16HNSC (144)view →
This table ranks reproducible IGKV1OR-3 RNA expression–survival associations across cancer types. High IGKV1OR-3 expression shows unfavorable associations in ACC, UVM and UCEC, but favorable associations in HNSC, COAD and LUAD. The HNSC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify HNSC as the clearest survival context for IGKV1OR-3 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.7620.645<.001144view →
ACCDFSTertileAll0.0100.667<.001135view →
UVMOSTertileAll0.1040.858<.00199view →
COADDFSQuartileAll0.6830.467.00849view →
LUADDFSTertileAll0.7670.597<.00143view →
UCECOSTertileIV0.0660.755<.00136view →
Pink = unfavorable, green = favorable. all 16 lineages →

IGKV1OR-3-HNSC (DFS)

Kaplan–Meier survival curve for IGKV1OR-3 RNA expression in HNSC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes IGKV1OR-3 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 8. The strongest signals are observed in COAD for RNA.
IGKV1OR-3 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot8COAD (8)view →
This table ranks reproducible tumor–normal expression differences for IGKV1OR-3. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. IGKV1OR-3 shows lower tumor expression in COAD, BRCA, READ and STAD and higher tumor expression in LUAD and LUSC. The COAD box plot shows higher IGKV1OR-3 RNA expression in normal versus tumor tissue (log2 FC = −0.911, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADMaleAll−0.911<.0018view →
LUADFemaleAll+0.540<.0017view →
BRCAFemaleII,III,IV−0.145.0034view →
READFemaleAll−0.572.0132view →
STADAllAll−0.632.0381view →
LUSCAllAll+0.232.0461view →
Green = repressed in tumor. all 8 lineages →

IGKV1OR-3-COAD

Tumor-vs-normal expression box plot for IGKV1OR-3 in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with IGKV1OR-3 in patient tissues and cancer cell lines. In patient samples, IGKV1OR-3 shows the broadest associations at the RNA and protein expression levels, with BRCA recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Function (RNA)6,508BRCA (3058)view →
RNA5,500ESCA (1709)view →