IGKV1-12

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGKV1-12 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,694 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible IGKV1-12-associated proteins across cancer lineages are IL16, MZB1, and DOCK2. Each is linked with IGKV1-12 in more than 9 cancer types. Because this analysis shows association rather than direction, both IGKV1-12-to-partner and partner-to-IGKV1-12 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IGKV1-12 versus IL16 in OV, with a Pearson correlation of 0.61.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (IGKV1-12→partner) and Y-score (partner→IGKV1-12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVIL16 →+0.663+3.649<.001<.001310
OVMZB1 →+1.613+3.943<.001<.001310
BRCADOCK2 →+0.602+2.787<.001<.001310
OVHCLS1 →+0.711+3.235<.001<.001310
BRCAISG20 →+0.793+2.650<.001<.00139
OVANKRD44 →+0.516+3.255<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,694 associations by consensus.

IGKV1-12 vs IL16 — OV

Per-sample scatter of IGKV1-12 vs IL16 in OV (Pearson r = 0.61).

Explore this scatter interactively →

Exploration