IGHV3-43

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHV3-43 protein abundance is significantly associated with the RNA expression of many other genes, with 8,192 significant associations in total. OV shows the largest number of these associations.

The most reproducible IGHV3-43-associated genes across cancer lineages are ENPP2, LAX1, and IGHV1-58. Each is linked with IGHV3-43 in more than 4 cancer types. Because this analysis shows association rather than direction, both IGHV3-43-to-partner and partner-to-IGHV3-43 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IGHV3-43 versus ENPP2 in GBM, with a Pearson correlation of 0.41.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHV3-43→partner) and Y-score (partner→IGHV3-43) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMENPP2 →+1.837+0.815<.001<.00135
UCECLAX1 →+0.919+0.654.008.00134
HNSCIGHV1-58 →+2.028+0.519.001.00534
OVLINC02362 →+1.080+1.183.006<.00134
LUADIGHV3OR16-9 →+1.498+0.701<.001<.00134
LUADFCRLA →+0.907+0.648<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,192 associations by consensus.

IGHV3-43 vs ENPP2 — GBM

Per-sample scatter of IGHV3-43 vs ENPP2 in GBM (Pearson r = 0.41).

Explore this scatter interactively →

Exploration