IGHV3-35

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV3-35 RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of IGHV3-35’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where IGHV3-35 RNA is repressed in tumor relative to normal tissue. In most cancer types IGHV3-35 is over-expressed in tumor, although a few such as COAD and BRCA show the opposite, repressed pattern.

COAD, LUAD, and BRCA are the cancer types where IGHV3-35 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in IGHV3-35 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADFemaleIII,IV−3.452<.00111view →
LUADFemaleAll+1.544<.0017view →
BRCAFemaleII,III,IV−0.536.0016view →
KIRCMaleAll+0.872<.0014view →
READAllAll−2.036.0013view →
STADAllIV−3.986.0252view →
PAADFemaleAll−1.865.0352view →
LIHCMaleAll−0.482<.0012view →
PRADAllAll+0.214.0462view →
THCAFemaleIII,IV−0.603.0461view →
KIRPAllAll−0.395.0301view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 11 lineages.

Exploration