IGHV3-15

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHV3-15 mutation is significantly associated with the RNA expression of many other genes, with 92 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible IGHV3-15-associated genes across cancer lineages are MIR190B, TRAJ52, and RPSAP50. Each is linked with IGHV3-15 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGHV3-15-to-partner and partner-to-IGHV3-15 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHV3-15→partner) and Y-score (partner→IGHV3-15) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMMIR190B →+0.158+3.356<.001.00532
COADTRAJ52 →+1.284+4.754<.001.00331
COADRPSAP50 →+0.165+4.237.006.00831
COADIGLVIV-66-1 →+0.162+4.516<.001.00931
COADMIR3922 →+0.891+5.392<.001.00231
COADMIR3135A →+0.587+4.602<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 92 associations by consensus.

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