IGHV1-68

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV1-68 RNA differs between tumor and matched normal tissue in 7 of 18 cancer types tested, making tumor–normal expression one of IGHV1-68’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where IGHV1-68 RNA is repressed in tumor relative to normal tissue. In most cancer types IGHV1-68 is over-expressed in tumor, although a few such as COAD and BRCA show the opposite, repressed pattern.

COAD, LUAD, and BRCA are the cancer types where IGHV1-68 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in IGHV1-68 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADFemaleAll−1.220<.0017view →
LUADAllAll+0.664<.0017view →
BRCAFemaleII,III,IV−0.158.0144view →
PAADFemaleAll−0.415.0072view →
READFemaleAll−0.862.0481view →
LUSCAllAll+0.375.0491view →
LIHCMaleAll−0.101.0251view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 7 strongest of 7 lineages.

IGHV1-68–COAD

Tumor-vs-normal expression box plot for IGHV1-68 RNA in COAD.

Open the COAD breakdown →

Exploration