IGHV1-58

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHV1-58 mutation is significantly associated with the RNA expression of many other genes, with 101 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible IGHV1-58-associated genes across cancer lineages are MIR215, LINC02348, and RNU6-236P. Each is linked with IGHV1-58 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGHV1-58-to-partner and partner-to-IGHV1-58 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHV1-58→partner) and Y-score (partner→IGHV1-58) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADMIR215 →+0.695+3.878.003.00132
SKCMLINC02348 →+0.220+4.430<.001<.00132
UCECRNU6-236P →+0.377+3.193.006.00132
UCECOR2AT2P →+0.085+3.304<.001.00232
SKCMRNU6-353P →+0.642+2.993<.001.00632
UCECMIR4727 →+0.408+3.329<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 101 associations by consensus.

Exploration