IGHV1-58

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV1-58 RNA is linked to patient survival in 22 of 34 cancer types, making it the most broadly survival-associated IGHV1-58 data layer compared with 2 for mutation status and 2 for mass-spec protein.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher IGHV1-58 RNA is associated with better disease-free survival. In most high-consensus cancer types, elevated IGHV1-58 expression acts as an unfavorable survival marker, although some lineages such as HNSC and SKCM show a favorable association.

HNSC, SKCM, and BRCA are the cancer types where IGHV1-58 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.7820.637<.001144view →
SKCMDFSQuartileAll0.7920.531<.00194view →
BRCADFSMedianAll0.9710.926<.00164view →
LGGDFSTertileAll0.2810.468<.00136view →
UCECOSQuartileIII,IV0.8430.388<.00134view →
OVDFSQuartileAll0.1820.106.01328view →
KIRPDFSMedianAll0.5970.888.00622view →
TGCTDFSMedianAll0.9140.751.00920view →
UCSOSMedianIV0.2400.616.01918view →
SARCOSQuartileAll0.9290.803.00218view →
LUADOSQuartileII,III,IV0.8000.537.01315view →
LIHCDFSMedianIII,IV0.5830.253<.00114view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 22 lineages.

Exploration