IGHV1-24

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV1-24 RNA is linked to patient survival in 24 of 34 cancer types, making it the most broadly survival-associated IGHV1-24 data layer compared with 2 for mutation status and 6 for mass-spec protein.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher IGHV1-24 RNA is associated with better disease-free survival. In most high-consensus cancer types, elevated IGHV1-24 expression acts as an unfavorable survival marker, although some lineages such as HNSC and SKCM show a favorable association.

HNSC, SKCM, and BRCA are the cancer types where IGHV1-24 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.6650.541<.001144view →
SKCMOSQuartileII,III,IV0.9370.694<.00151view →
BRCADFSQuartileAll0.9710.920.00441view →
LGGOSQuartileAll0.8310.914.00129view →
UCECOSQuartileIII,IV0.6980.338.00528view →
CESCDFSQuartileAll0.8560.667.00526view →
SARCDFSTertileAll0.6360.390.00321view →
GBMOSQuartileAll0.2470.487.00618view →
KIRPDFSTertileAll0.5630.878.00818view →
LUADOSMedianII,III,IV0.7030.482.00317view →
UVMDFSQuartileAll0.4890.823.00613view →
LUSCDFSMedianIII,IV0.4420.188.00513view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 24 lineages.

Exploration