IGHV1-24

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV1-24 RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of IGHV1-24’s most consistent transcriptional readouts.

The strongest signal is observed in lung adenocarcinoma (LUAD), where IGHV1-24 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types IGHV1-24 is over-expressed in tumor, although a few such as COAD and PAAD show the opposite, repressed pattern.

LUAD, HNSC, and COAD are the cancer types where IGHV1-24 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in IGHV1-24 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUADMaleAll+2.699<.0018view →
HNSCAllIII,IV+2.115.0056view →
COADAllAll−1.677<.0016view →
PAADAllAll−3.199.0192view →
READAllAll−2.383.0402view →
ESCAFemaleAll+2.266.0102view →
LIHCMaleAll−2.258<.0012view →
KICHAllII,III,IV−1.571.0342view →
LUSCMaleAll+1.364.0232view →
KIRCAllAll+1.065.0022view →
STADAllIV−3.043.0191view →
BLCAAllIV+3.040.0461view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

Exploration