IGHV1-18

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV1-18 mass-spec protein is linked to patient survival in 4 of 34 cancer types, making it a survival-associated IGHV1-18 data layer compared with 23 for mass-spec protein and 3 for mutation status.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher IGHV1-18 mass-spec protein is associated with better overall survival. In most high-consensus cancer types, elevated IGHV1-18 expression acts as an unfavorable survival marker, although some lineages such as HNSC and LUAD show a favorable association.

HNSC, LUAD, and UCEC are the cancer types where IGHV1-18 mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCOSMedianAll1.0000.484.03812view →
LUADDFSTertileAll0.9390.583.0205view →
UCECDFSQuartileAll0.8651.000.0354view →
CCRCCDFSQuartileIII,IV0.7310.290.0093view →
Pink = unfavorable, green = favorable. Showing the 4 strongest of 4 lineages.

Exploration