IFT74

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IFT74 mutation is significantly associated with the RNA expression of many other genes, with 2,260 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible IFT74-associated genes across cancer lineages are DPP4-DT, TRAV1-1, and RNU7-28P. Each is linked with IFT74 in more than 1 cancer types. Because this analysis shows association rather than direction, both IFT74-to-partner and partner-to-IFT74 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DPP4-DT grouped by IFT74-low versus IFT74-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IFT74→partner) and Y-score (partner→IFT74) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECDPP4-DT →+0.253+1.913.007.00232
UCECTRAV1-1 →+0.389+2.447<.001<.00132
LUADRNU7-28P →+0.711+5.473.001<.00132
LUSCTIPINP1 →+0.123+3.241<.001.00532
LUSCH4P1 →+0.115+3.900.004.00132
LUSCMIR4710 →+0.446+3.922<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,260 associations by consensus.

DPP4-DT by IFT74 expression — UCEC

Box plot of DPP4-DT in IFT74-low vs IFT74-high samples in UCEC.

Explore this box plot interactively →

Exploration