IFNL4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, IFNL4 RNA expression is significantly associated with the go_rna of many other GO terms, with 290 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible IFNL4-associated GO terms across cancer lineages are Regulation by virus of viral protein levels in host cell, Icosanoid transport, and Regulation of viral life cycle. Each is linked with IFNL4 in more than 4 cancer types. Because this analysis shows association rather than direction, both IFNL4-to-partner and partner-to-IFNL4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation by virus of viral protein levels in host cell grouped by IFNL4-low versus IFNL4-high in LARGE_INTESTINE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (IFNL4→partner) and Y-score (partner→IFNL4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINERegulation by virus of viral protein levels in host cell →+0.172+0.006<.001.00935
BLOOD_LymphomaIcosanoid transport →-0.077-0.007.004.00634
LARGE_INTESTINERegulation of viral life cycle →+0.147+0.007<.001.00734
BLOOD_LymphomaNegative regulation of gliogenesis →+0.077+0.014.006.00533
BLOOD_LymphomaMitochondrion-endoplasmic reticulum membrane tethering →+0.130+0.008<.001.00333
BLOOD_LymphomaRegulation of tumor necrosis factor production →+0.057+0.007.002.00633
Each partner links to its Q-omics profile. Showing the 6 strongest of 290 associations by consensus.

Regulation by virus of viral protein levels in host cell by IFNL4 expression — LARGE_INTESTINE

Box plot of Regulation by virus of viral protein levels in host cell in IFNL4-low vs IFNL4-high samples in LARGE_INTESTINE.

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