IFNE

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, IFNE RNA expression is significantly associated with the go_rna of many other GO terms, with 3,646 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible IFNE-associated GO terms across cancer lineages are Natural killer cell activation involved in immune response, Positive regulation of canonical NF-kappaB signal transduction, and Small GTPase-mediated signal transduction. Each is linked with IFNE in more than 9 cancer types. Because this analysis shows association rather than direction, both IFNE-to-partner and partner-to-IFNE results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (IFNE→partner) and Y-score (partner→IFNE) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINENatural killer cell activation involved in immune response →-0.359-1.038<.001.001310
BONEPositive regulation of canonical NF-kappaB signal transduction →+0.074+0.428<.001.009310
OVARYSmall GTPase-mediated signal transduction →+0.053+0.784<.001<.00139
LUNG_NSCLC_LUSCRegulation of corticosterone secretion →+0.194+0.987.005.00239
SKINPositive regulation of cell maturation →-0.185-0.578<.001<.00138
BREASTRegulation of cell-matrix adhesion →+0.086+0.623<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,646 associations by consensus.

Exploration