IFIT3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IFIT3 protein abundance is significantly associated with the RNA expression of many other genes, with 10,196 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible IFIT3-associated genes across cancer lineages are ETV7, DDX58, and OAS3. Each is linked with IFIT3 in more than 9 cancer types. Because this analysis shows association rather than direction, both IFIT3-to-partner and partner-to-IFIT3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IFIT3 versus ETV7 in BRCA, with a Pearson correlation of 0.59.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IFIT3→partner) and Y-score (partner→IFIT3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAETV7 →+1.349+0.775<.001<.001310
HNSCDDX58 →+1.402+1.292<.001<.001310
OVOAS3 →+1.479+0.778<.001<.001310
OVOAS2 →+1.665+0.844<.001<.001310
HNSCIFIH1 →+1.407+1.341<.001<.001310
HNSCSTAT1 →+1.171+1.208<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,196 associations by consensus.

IFIT3 vs ETV7 — BRCA

Per-sample scatter of IFIT3 vs ETV7 in BRCA (Pearson r = 0.59).

Explore this scatter interactively →

Exploration