IFIH1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IFIH1 protein abundance is significantly associated with the RNA expression of many other genes, with 12,500 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible IFIH1-associated genes across cancer lineages are DDX58, NMI, and PARP9. Each is linked with IFIH1 in more than 9 cancer types. Because this analysis shows association rather than direction, both IFIH1-to-partner and partner-to-IFIH1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IFIH1 versus DDX58 in HNSC, with a Pearson correlation of 0.72.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IFIH1→partner) and Y-score (partner→IFIH1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCDDX58 →+1.497+0.854<.001<.001310
UCECNMI →+0.826+0.538<.001<.001310
COADPARP9 →+0.926+0.449<.001<.001310
HNSCHERC6 →+1.573+0.833<.001<.00139
BRCAETV7 →+1.602+0.770<.001<.00139
GBMOAS2 →+1.543+0.609<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,500 associations by consensus.

IFIH1 vs DDX58 — HNSC

Per-sample scatter of IFIH1 vs DDX58 in HNSC (Pearson r = 0.72).

Explore this scatter interactively →

Exploration