IFI6

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, IFI6 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible IFI6-associated genes across cancer lineages are ELOA3DP, IQCF5, and TBC1D3. Each is linked with IFI6 in more than 1 cancer types. Because this analysis shows association rather than direction, both IFI6-to-partner and partner-to-IFI6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ELOA3DP grouped by IFI6-low versus IFI6-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IFI6→partner) and Y-score (partner→IFI6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEELOA3DP →+0.031+4.273<.001.00631
LARGE_INTESTINEIQCF5 →+0.037+5.022<.001.00231
LARGE_INTESTINETBC1D3 →+0.091+4.273<.001.00631
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

ELOA3DP by IFI6 expression — LARGE_INTESTINE

Box plot of ELOA3DP in IFI6-low vs IFI6-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration