IDS

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IDS mutation is significantly associated with the total protein of many other genes, with 55 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible IDS-associated genes across cancer lineages are eIF4E, Cyclin-E1, and GAPDH. Each is linked with IDS in more than 2 cancer types. Because this analysis shows association rather than direction, both IDS-to-partner and partner-to-IDS results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by IDS-low versus IDS-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IDS→partner) and Y-score (partner→IDS) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.170+2.321.006<.00133
BRCACyclin-E1 →+0.443+2.812.008.03732
BRCAGAPDH →+1.034+3.169.001.02023
UCECeEF2 →+0.269+1.678.010.02132
UCECKu80 →+0.241+1.446<.001.00332
UCECNotch1 →+0.114+2.100.005.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 55 associations by consensus.

eIF4E by IDS expression — UCEC

Box plot of eIF4E in IDS-low vs IDS-high samples in UCEC.

Explore this box plot interactively →

Exploration