IDH2-DT

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, IDH2-DT RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of IDH2-DT’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal clear cell carcinoma (KIRC), where IDH2-DT RNA is repressed in tumor relative to normal tissue. In most cancer types IDH2-DT is over-expressed in tumor, although a few such as KIRC and KIRP show the opposite, repressed pattern.

KIRC, KIRP, and HNSC are the cancer types where IDH2-DT tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in IDH2-DT RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRCMaleII,III,IV−2.127<.00112view →
KIRPMaleAll−2.153<.00111view →
HNSCMaleAll−0.713<.0018view →
THCAAllAll−0.203<.0017view →
BRCAAllAll+0.382<.0014view →
LUSCMaleAll+0.175.0014view →
UCECAllIV+0.644.0032view →
LUADAllAll+0.225.0042view →
STADMaleIV−1.175.0261view →
ESCAAllAll−0.980.0181view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

IDH2-DT–KIRC

Tumor-vs-normal expression box plot for IDH2-DT RNA in KIRC.

Open the KIRC breakdown →

Exploration