ID4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ID4 mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. OVARY shows the largest number of these associations.

The most reproducible ID4-associated genes across cancer lineages are NLRP8 and SUPT20HL1. Each is linked with ID4 in more than 1 cancer types. Because this analysis shows association rather than direction, both ID4-to-partner and partner-to-ID4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NLRP8 grouped by ID4-low versus ID4-high in OVARY.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ID4→partner) and Y-score (partner→ID4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYNLRP8 →+0.006+5.196<.001.00531
OVARYSUPT20HL1 →+0.123+5.807<.001.00131
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

NLRP8 by ID4 expression — OVARY

Box plot of NLRP8 in ID4-low vs ID4-high samples in OVARY.

Explore this box plot interactively →

Exploration