HSPA4L

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, HSPA4L mutation is significantly associated with the RNA expression of many other genes, with 17 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible HSPA4L-associated genes across cancer lineages are CIB4, LRRC52, and ANKRD40CL. Each is linked with HSPA4L in more than 1 cancer types. Because this analysis shows association rather than direction, both HSPA4L-to-partner and partner-to-HSPA4L results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CIB4 grouped by HSPA4L-low versus HSPA4L-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HSPA4L→partner) and Y-score (partner→HSPA4L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaCIB4 →+0.201+4.209<.001.00131
BLOOD_LymphomaLRRC52 →+0.653+3.342<.001.00831
BLOOD_LymphomaANKRD40CL →+0.494+3.506.001.00831
BLOOD_LymphomaGLOD5 →+0.053+3.321<.001.00631
BLOOD_LymphomaOR11H4 →+0.031+3.959<.001.00231
BLOOD_LymphomaPRM3 →+0.112+4.129<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

CIB4 by HSPA4L expression — BLOOD_Lymphoma

Box plot of CIB4 in HSPA4L-low vs HSPA4L-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration