HSPA4

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, HSPA4 mutation is significantly associated with the mutation status of many other genes, with 3,299 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible HSPA4-associated genes across cancer lineages are FMNL3, ABCA2, and CNGB1. Each is linked with HSPA4 in more than 3 cancer types. Because this analysis shows association rather than direction, both HSPA4-to-partner and partner-to-HSPA4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FMNL3 grouped by HSPA4-low versus HSPA4-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HSPA4→partner) and Y-score (partner→HSPA4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaFMNL3 →+3.870+4.050.002.00214
BLOOD_LeukemiaABCA2 →+2.115+3.198.009.00914
BLOOD_LeukemiaCNGB1 →+2.870+3.347.009.00914
BLOOD_LymphomaTRPC6 →+4.429+5.247.005.00514
BLOOD_LeukemiaSLC26A9 →+3.870+4.050.002.00214
BLOOD_LeukemiaPOLR2A →+3.799+5.531<.001<.00114
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,299 associations by consensus.

FMNL3 by HSPA4 expression — BLOOD_Leukemia

Box plot of FMNL3 in HSPA4-low vs HSPA4-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration