HRC

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HRC RNA expression is significantly associated with the protein abundance of many other proteins, with 19,971 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible HRC-associated proteins across cancer lineages are VWF, TNXB, and PLAC9. Each is linked with HRC in more than 8 cancer types. Because this analysis shows association rather than direction, both HRC-to-partner and partner-to-HRC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HRC versus VWF in BRCA, with a Pearson correlation of 0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HRC→partner) and Y-score (partner→HRC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAVWF →+0.724+0.803<.001<.00139
CCRCCTNXB →+0.853+0.853<.001<.00138
CCRCCPLAC9 →+0.850+0.852<.001<.00138
BRCACAVIN2 →+0.923+0.564<.001<.00138
CCRCCMMRN2 →+0.649+1.017<.001<.00138
BRCACNRIP1 →+0.646+0.410<.001.00638
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,971 associations by consensus.

HRC vs VWF — BRCA

Per-sample scatter of HRC vs VWF in BRCA (Pearson r = 0.45).

Explore this scatter interactively →

Exploration