HRC

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HRC protein abundance is significantly associated with the RNA expression of many other genes, with 10,730 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible HRC-associated genes across cancer lineages are MYCT1, KLF2, and MMRN1. Each is linked with HRC in more than 5 cancer types. Because this analysis shows association rather than direction, both HRC-to-partner and partner-to-HRC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HRC versus MYCT1 in CCRCC, with a Pearson correlation of 0.62.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HRC→partner) and Y-score (partner→HRC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCMYCT1 →+0.975+0.580<.001<.00135
CCRCCKLF2 →+0.912+0.659<.001<.00135
LUADMMRN1 →+1.322+0.474<.001.00435
HNSCKCNN3 →+0.909+1.496<.001<.00135
CCRCCDIPK2B →+0.820+0.577<.001<.00135
LUADRACGAP1 →-0.871-0.486<.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,730 associations by consensus.

HRC vs MYCT1 — CCRCC

Per-sample scatter of HRC vs MYCT1 in CCRCC (Pearson r = 0.62).

Explore this scatter interactively →

Exploration