HOXC8

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HOXC8 protein abundance is significantly associated with the RNA expression of many other genes, with 2,874 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible HOXC8-associated genes across cancer lineages are ZMAT3, LRRC3B, and RNA5SP245. Each is linked with HOXC8 in more than 1 cancer types. Because this analysis shows association rather than direction, both HOXC8-to-partner and partner-to-HOXC8 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HOXC8 versus ZMAT3 in BRCA, with a Pearson correlation of 0.41.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HOXC8→partner) and Y-score (partner→HOXC8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAZMAT3 →+0.524+0.876.003.00231
BRCALRRC3B →+0.084+1.017.001.00231
BRCARNA5SP245 →+0.782+1.150.002<.00131
BRCACNTN4-AS2 →+0.480+1.119.002<.00131
BRCALINC01743 →-0.124-0.863.001.00531
BRCARN7SL861P →+0.418+0.959.005.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,874 associations by consensus.

HOXC8 vs ZMAT3 — BRCA

Per-sample scatter of HOXC8 vs ZMAT3 in BRCA (Pearson r = 0.41).

Explore this scatter interactively →

Exploration