CNTN4-AS2

associated omics data
CNTN4 antisense RNA 2Genealiases: []

Q-omics provides the consensus-scored CNTN4-AS2 profile across patient tissues and cancer cell-line models. CNTN4-AS2 expression is associated with patient survival in 14 of 34 cancer types, with the highest sampling consensus in LGG. Among the 18 cancer types available for tumor–normal comparison, CNTN4-AS2 is differentially expressed in 9, with the highest sampling consensus in THCA. Additionally, CNTN4-AS2 RNA expression shows 14,735 significant protein co-abundance associations, with the highest sampling consensus in GBM. Together, these results highlight LGG, THCA, and GBM as cancer lineages where CNTN4-AS2 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes CNTN4-AS2 survival associations across molecular data types. CNTN4-AS2 RNA expression shows survival associations in the most cancer types (14). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
CNTN4-AS2 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier14LGG (39)view →
This table ranks reproducible CNTN4-AS2 RNA expression–survival associations across cancer types. High CNTN4-AS2 expression shows unfavorable associations in STAD, HNSC and OV, but favorable associations in LGG, CHOL and ESCA. The LGG Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify LGG as the clearest survival context for CNTN4-AS2 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
LGGDFSMedianAll0.8090.661<.00139view →
STADDFSQuartileAll0.4400.585.00334view →
CHOLDFSTertileAll1.0000.266.01527view →
HNSCOSTertileAll0.2790.614.01027view →
OVDFSQuartileII,III,IV0.3230.398.03824view →
ESCAOSTertileIII,IV0.6460.334.00618view →
Pink = unfavorable, green = favorable. all 14 lineages →

CNTN4-AS2-LGG (DFS)

Kaplan–Meier survival curve for CNTN4-AS2 RNA expression in LGG: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes CNTN4-AS2 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 9. The strongest signals are observed in THCA for RNA.
CNTN4-AS2 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot9THCA (9)view →
This table ranks reproducible tumor–normal expression differences for CNTN4-AS2. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. CNTN4-AS2 shows lower tumor expression in THCA, KICH, KIRC, COAD, LUSC and UCEC. The THCA box plot shows higher CNTN4-AS2 RNA expression in normal versus tumor tissue (log2 FC = −0.657, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
THCAFemaleII,III,IV−0.657<.0019view →
KICHMaleAll−0.259<.0019view →
KIRCAllII,III,IV−0.162<.0019view →
COADAllII,III,IV−0.155<.0018view →
LUSCAllAll−0.059.0113view →
UCECAllAll−0.246.0012view →
Green = repressed in tumor. all 9 lineages →

CNTN4-AS2-THCA

Tumor-vs-normal expression box plot for CNTN4-AS2 in THCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with CNTN4-AS2 in patient tissues and cancer cell lines. In patient samples, CNTN4-AS2 shows the broadest associations at the RNA and protein expression levels, with GBM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)14,735GBM (5451)view →
RNA13,678THYM (7026)view →