HOXB5

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HOXB5 RNA expression is significantly associated with the RNA expression of many other genes, with 17,503 significant associations in total. ACC shows the largest number of these associations.

The most reproducible HOXB5-associated genes across cancer lineages are HOXB6, HOXB-AS3, and HOXB3. Each is linked with HOXB5 in more than 33 cancer types. Because this analysis shows association rather than direction, both HOXB5-to-partner and partner-to-HOXB5 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HOXB5 versus HOXB6 in LAML, with a Pearson correlation of 0.97.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HOXB5→partner) and Y-score (partner→HOXB5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LAMLHOXB6 →+3.784+3.829<.001<.001334
LAMLHOXB-AS3 →+3.890+3.869<.001<.001332
LAMLHOXB3 →+4.153+3.511<.001<.001331
CHOLHOXB7 →+2.427+1.362<.001<.001331
UCSHOXB8 →+4.206+3.626<.001<.001331
SCLCHOXB9 →+3.479+2.787<.001<.001330
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,503 associations by consensus.

HOXB5 vs HOXB6 — LAML

Per-sample scatter of HOXB5 vs HOXB6 in LAML (Pearson r = 0.97).

Explore this scatter interactively →

Exploration