HOXB5

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HOXB5 mutation is significantly associated with the immune_cell of many other genes, with 2 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible HOXB5-associated genes across cancer lineages are Pericytes and Th2 cells. Each is linked with HOXB5 in more than 1 cancer types. Because this analysis shows association rather than direction, both HOXB5-to-partner and partner-to-HOXB5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Pericytes grouped by HOXB5-low versus HOXB5-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HOXB5→partner) and Y-score (partner→HOXB5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMPericytes →+0.090+3.160.004.02431
UCECTh2 cells →+0.329+3.008<.001.01931
Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

Pericytes by HOXB5 expression — SKCM

Box plot of Pericytes in HOXB5-low vs HOXB5-high samples in SKCM.

Explore this box plot interactively →

Exploration