HOXA7

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HOXA7 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,754 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible HOXA7-associated proteins across cancer lineages are MTA1, CCDC88B_S1379, and CYRIB. Each is linked with HOXA7 in more than 4 cancer types. Because this analysis shows association rather than direction, both HOXA7-to-partner and partner-to-HOXA7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HOXA7 versus MTA1 in HNSC, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HOXA7→partner) and Y-score (partner→HOXA7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCMTA1 →+0.404+0.635<.001<.00135
CCRCCCCDC88B_S1379 →-0.704-0.912<.001<.00134
GBMCYRIB →-0.255-0.671.001.00134
CCRCCDEF6 →-0.365-0.618.002<.00134
LSCCDOCK8 →-0.488-0.507<.001<.00134
LSCCAIF1 →-0.548-0.556<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,754 associations by consensus.

HOXA7 vs MTA1 — HNSC

Per-sample scatter of HOXA7 vs MTA1 in HNSC (Pearson r = 0.39).

Explore this scatter interactively →

Exploration