HOXA13

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HOXA13 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,286 significant associations in total. GBM shows the largest number of these associations.

The most reproducible HOXA13-associated proteins across cancer lineages are IGF2BP3, PLCG2, and SUSD2. Each is linked with HOXA13 in more than 4 cancer types. Because this analysis shows association rather than direction, both HOXA13-to-partner and partner-to-HOXA13 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HOXA13 versus IGF2BP3 in CCRCC, with a Pearson correlation of 0.58.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (HOXA13→partner) and Y-score (partner→HOXA13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCIGF2BP3 →+1.487+0.785<.001<.00135
LSCCPLCG2 →-0.399-0.865.004<.00133
GBMSUSD2 →-0.581-0.671.002.00233
HNSCTOP2A →+0.640+0.631<.001.00233
HNSCIRS2_S608 →+0.851+0.698.001.00333
CCRCCAP3B2_S272 →+0.955+0.555.003.00533
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,286 associations by consensus.

HOXA13 vs IGF2BP3 — CCRCC

Per-sample scatter of HOXA13 vs IGF2BP3 in CCRCC (Pearson r = 0.58).

Explore this scatter interactively →

Exploration