HNRNPCL3

Across TCGA cell cohorts, HNRNPCL3 RNA expression is significantly associated with the RNA expression of many other genes, with 1,192 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible HNRNPCL3-associated genes across cancer lineages are CSH1, SPATA31A3, and PRAMEF19. Each is linked with HNRNPCL3 in more than 3 cancer types. Because this analysis shows association rather than direction, both HNRNPCL3-to-partner and partner-to-HNRNPCL3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HNRNPCL3 versus CSH1 in OESOPHAGUS, with a Pearson correlation of 0.52.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HNRNPCL3→partner) and Y-score (partner→HNRNPCL3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OESOPHAGUS	CSH1 →	+0.067	+0.010	.002	.001	3	4
UPPER_AERODIGESTIVE_TRACT	SPATA31A3 →	+0.143	+0.122	.001	.001	3	4
LUNG_NSCLC_LUSC	PRAMEF19 →	+0.125	+0.077	.003	<.001	3	4
UPPER_AERODIGESTIVE_TRACT	PRAMEF6 →	+0.226	+0.107	<.001	<.001	3	4
LUNG_NSCLC_LUSC	KRTAP10-3 →	+0.095	+0.061	<.001	<.001	3	4
URINARY_TRACT	USP29 →	+0.033	+0.047	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,192 associations by consensus.

HNRNPCL3 vs CSH1 — OESOPHAGUS

Explore this scatter interactively →