HNRNPA1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, HNRNPA1 mutation is significantly associated with the total protein of many other genes, with 10 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible HNRNPA1-associated genes across cancer lineages are ASNS, MEK1, and Akt_pS473. Each is linked with HNRNPA1 in more than 2 cancer types. Because this analysis shows association rather than direction, both HNRNPA1-to-partner and partner-to-HNRNPA1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ASNS grouped by HNRNPA1-low versus HNRNPA1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HNRNPA1→partner) and Y-score (partner→HNRNPA1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECASNS →+0.597+2.321<.001.03433
UCECMEK1 →+0.432+2.321.018.03532
UCECAkt_pS473 →+0.718+2.321.045.03532
UCECAkt_pT308 →+0.671+2.321.033.03532
UCECPRAS40_pT246 →+0.217+2.335.011.02031
UCECS6_pS240_S244 →+0.471+2.321.021.03531
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

ASNS by HNRNPA1 expression — UCEC

Box plot of ASNS in HNRNPA1-low vs HNRNPA1-high samples in UCEC.

Explore this box plot interactively →

Exploration