HMGN2P4

Across TCGA patient cohorts, HMGN2P4 RNA expression is significantly associated with the RNA expression of many other genes, with 16,315 significant associations in total. ACC shows the largest number of these associations.

The most reproducible HMGN2P4-associated genes across cancer lineages are HMGN2, HMGN2P3, and SNRNP40. Each is linked with HMGN2P4 in more than 30 cancer types. Because this analysis shows association rather than direction, both HMGN2P4-to-partner and partner-to-HMGN2P4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HMGN2P4 versus HMGN2 in ACC, with a Pearson correlation of 0.80.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGN2P4→partner) and Y-score (partner→HMGN2P4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ACC	HMGN2 →	+1.476	+0.630	<.001	<.001	3	31
THYM	HMGN2P3 →	+1.628	+1.054	<.001	<.001	3	31
ACC	SNRNP40 →	+1.221	+0.589	<.001	<.001	3	31
ACC	SF3A3 →	+1.023	+0.551	<.001	<.001	3	31
OV	HMGN2P6 →	+0.836	+0.740	<.001	<.001	3	30
DLBC	HNRNPA3P6 →	+0.749	+0.796	.001	.001	3	30

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,315 associations by consensus.

HMGN2P4 vs HMGN2 — ACC

Explore this scatter interactively →