HMGN2P20

Across TCGA patient cohorts, HMGN2P20 RNA expression is significantly associated with the RNA expression of many other genes, with 5,522 significant associations in total. ESCA shows the largest number of these associations.

The most reproducible HMGN2P20-associated genes across cancer lineages are EEF1A1P3, SEPTIN7P6, and CALM2P2. Each is linked with HMGN2P20 in more than 20 cancer types. Because this analysis shows association rather than direction, both HMGN2P20-to-partner and partner-to-HMGN2P20 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HMGN2P20 versus EEF1A1P3 in UCS, with a Pearson correlation of 0.43.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HMGN2P20→partner) and Y-score (partner→HMGN2P20) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCS	EEF1A1P3 →	+0.674	+0.303	<.001	.002	2	21
LAML	SEPTIN7P6 →	+0.700	+0.422	<.001	<.001	3	18
LAML	CALM2P2 →	+0.716	+0.588	<.001	<.001	3	18
LAML	PA2G4P6 →	+0.522	+0.446	<.001	<.001	3	18
UCS	EEF1A1P10 →	+0.859	+0.318	<.001	.001	3	17
LAML	RPL5P30 →	+0.566	+0.604	<.001	<.001	2	18

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,522 associations by consensus.

HMGN2P20 vs EEF1A1P3 — UCS

Explore this scatter interactively →